Publications

AOC: A Snakemake workflow for the characterization of natural selection in protein-coding genes

Lucaci AG, Kosakovsky Pond SL

Diversity and distinctive characteristics of the global RNA virome in urban and peri-urban environments

Gao Z, Wu J, Lucaci AG, et al.

Consensus statement from the second RdRp Summit: towards a unified framework for RNA virus biology

Lucaci AG, Shaikh H, Chong LC, et al.

Consensus statement · Shared equal contribution

Viral evolution in the cosmos

Trovao NS, Lucaci AG, Pradeep N, et al.

In Fundamentals of Space Medicine and Clinical Technology

Ecological interactions and genomic innovation fueled the evolution of ray-finned fish endothermy

Melendez-Vazquez F, Lucaci AG, Selberg A, et al.

The evolution of mammalian Rem2: unraveling the impact of purifying selection and coevolution on protein function, and implications for human disorders

Lucaci AG, Brew WE, Lamanna J, Selberg A, Carnevale V, Moore AR, Kosakovsky Pond SL

Spatially-distributed viral evolutionary analysis of Influenza A Virus (IAV)

Zlenko OB, Kit M. Yu., Bondarenko O, Gincu A. Edu., Lucaci A

Evolutionary Shortcuts via Multinucleotide Substitutions and Their Impact on Natural Selection Analyses

Lucaci AG, Zehr JD, Enard D, Thornton JW, Kosakovsky Pond SL

The evolution of BDNF is defined by strict purifying selection and prodomain spatial coevolution, but what does it mean for human brain disease?

Lucaci AG, Notaras MJ, Kosakovsky Pond SL, Colak D

RASCL: Rapid Assessment of Selection in CLades through molecular sequence analysis

Lucaci AG, Zehr JD, Shank SD, et al.

Human HspB1, HspB3, HspB5 and HspB8: Shaping these disease factors during vertebrate evolution

Benndorf R, Velazquez R, Zehr JD, Kosakovsky Pond SL, Martin JL, Lucaci AG

Extra base hits: Widespread empirical support for instantaneous multiple-nucleotide changes

Lucaci AG, Wisotsky SR, Shank SD, Weaver S, Kosakovsky Pond SL